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Approaches to Identify Novel Non-messenger RNAs in Bacteria and to Investigate their Biological Functions: RNA Mining
Publication
Vogel J,
Gerhart E,
Wagner H
(2005)
In: Handbook of RNA Biochemistry (eds Hartmann RK, Bindereif A, Schön A, Westhof E), 2, 595-613, 10.1002/9783527619504.ch36
In: Handbook of RNA Biochemistry (eds Hartmann RK, Bindereif A, Schön A, Westhof E), 2, 595-613, 10.1002/9783527619504.ch36
A ribosome-interacting jumbophage protein associates with the phage nucleus to facilitate efficient propagation
Publication
Wannasrichan W,
Krobthong S,
Morgan CJ,
Armbruster EG,
Gerovac M,
Yingchutrakul Y,
Wongtrakoongate P,
Vogel J,
Aonbangkhen C,
Nonejuie P,
Pogliano J,
Chaikeeratisak V
(2025)
PLOS Pathogens, 21, 2, e1012936, 10.1371/journal.ppat.1012936, 39992933
PLOS Pathogens, 21, 2, e1012936, 10.1371/journal.ppat.1012936, 39992933
Fusobacterium nucleatum interacts with cancer-associated fibroblasts to promote colorectal cancer
Publication
Karta J,
Meyers M,
Rodriguez F,
Koncina E,
Gilson C,
Klein E,
Gabola M,
Benzarti M,
Pérez Escriva P,
Molina Tijeras JA,
Correia Tavares Bernardino C,
Ponath F,
Carpentier A,
Pujabet MA,
Schmoetten M,
Tsenkova M,
Saoud P,
Gaigneaux A,
Ternes D,
Alonso L,
Zügel N,
Willemssen E,
Koppes P,
Léonard D,
Casanova LP,
Haan S,
Mittelbronn M,
Meiser J,
Pozdeev VI,
Vogel J,
Nuciforo PG,
Wilmes P,
Letellier E
(2025)
The EMBO Journal, online ahead of print, 10.1038/s44318-025-00542-w, 40846900
The EMBO Journal, online ahead of print, 10.1038/s44318-025-00542-w, 40846900
RNA toehold switch-based reporter assay to assess bacterial uptake of antisense oligomers
Publication
Sarkar P,
Popella L,
Pérez-Jiménez S,
Vogel J
(2025)
mBio, 16, 4, e0398324, 10.1128/mbio.03983-24, 40035593
mBio, 16, 4, e0398324, 10.1128/mbio.03983-24, 40035593
A comparative analysis of peptide-delivered antisense antibiotics employing diverse nucleotide mimics
Publication
Ghosh C,
Popella L,
Dhamodharan V,
Jung J,
Dietzsch J,
Barquist L,
Höbartner C,
Vogel J
(2024)
RNA, 30, 6, 624-643, 10.1261/rna.079969.124, 38413166
RNA, 30, 6, 624-643, 10.1261/rna.079969.124, 38413166
The RNA landscape of the human commensal Segatella copri reveals a small RNA essential for gut colonization
Publication
El Mouali Y,
Tawk C,
Huang KD,
Amend L,
Lesker TR,
Ponath F,
Vogel J,
Strowig T
(2024)
Cell Host & Microbe, 32, 11, 1910-1926.e6, 10.1016/j.chom.2024.09.008, 39368472
Cell Host & Microbe, 32, 11, 1910-1926.e6, 10.1016/j.chom.2024.09.008, 39368472
Cooperation of regulatory RNA and the RNA degradosome in transcript surveillance
Publication
Bandyra KJ,
Fröhlich KS,
Vogel J,
Rodnina M,
Goyal A,
Luisi BF
(2024)
Nucleic Acids Research, 52, 15, 9161-9173, 10.1093/nar/gkae455, 38842944
Nucleic Acids Research, 52, 15, 9161-9173, 10.1093/nar/gkae455, 38842944
Global Hfq-mediated RNA interactome of nitrogen starved Escherichia coli uncovers a conserved post-transcriptional regulatory axis required for optimal growth recovery
Publication
McQuail J,
Matera G,
Gräfenhan T,
Bischler T,
Haberkant P,
Stein F,
Vogel J,
Wigneshweraraj S
(2024)
Nucleic Acids Research, 52, 5, 2323-2339, 10.1093/nar/gkad1211, 38142457
Nucleic Acids Research, 52, 5, 2323-2339, 10.1093/nar/gkad1211, 38142457
Phage proteins target and co-opt host ribosomes immediately upon infection
Publication
Gerovac M,
Chihara K,
Wicke L,
Böttcher B,
Lavigne R,
Vogel J
(2024)
Nature Microbiology, 9, 3, 787-800, 10.1038/s41564-024-01616-x, 38443577
Nature Microbiology, 9, 3, 787-800, 10.1038/s41564-024-01616-x, 38443577
Exploring the transcriptional landscape of phage-host interactions using novel high-throughput approaches
Publication
Putzeys L,
Wicke L,
Brandão A,
Boon M,
Pires DP,
Azeredo J,
Vogel J,
Lavigne R,
Gerovac M
(2024)
Current Opinion in Microbiology, 77, 102419, 10.1016/j.mib.2023.102419, 38271748
Current Opinion in Microbiology, 77, 102419, 10.1016/j.mib.2023.102419, 38271748