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Experimental tools to identify RNA-protein interactions in Helicobacter pylori
Publication
Rieder R,
Reinhardt R,
Sharma CM,
Vogel J
(2012)
RNA Biology, 9, 4, 520-31, 10.4161/rna.20331, 22546936
RNA Biology, 9, 4, 520-31, 10.4161/rna.20331, 22546936
Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA
Publication
Corcoran CP,
Podkaminski D,
Papenfort K,
Urban JH,
Hinton JC,
Vogel J
(2012)
Molecular Microbiology, 84, 3, 428-45, 10.1111/j.1365-2958.2012.08031.x, 22458297
Molecular Microbiology, 84, 3, 428-45, 10.1111/j.1365-2958.2012.08031.x, 22458297
The seed region of a small RNA drives the controlled destruction of the target mRNA by the endoribonuclease RNase E
Publication
Bandyra KJ,
Said N,
Pfeiffer V,
Górna MW,
Vogel J,
Luisi BF
(2012)
Molecular Cell, 47, 6, 943-53, 10.1016/j.molcel.2012.07.015, 22902561
Molecular Cell, 47, 6, 943-53, 10.1016/j.molcel.2012.07.015, 22902561
The Primary Transcriptome of Barley Chloroplasts: Numerous Noncoding RNAs and the Dominating Role of the Plastid-Encoded RNA Polymerase
Publication
Zhelyazkova P,
Sharma CM,
Förstner KU,
Liere K,
Vogel J,
Börner T
(2012)
The Plant Cell, 24, 1, 123-36, 10.1105/tpc.111.089441, 22267485
The Plant Cell, 24, 1, 123-36, 10.1105/tpc.111.089441, 22267485
An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs
Publication
Chao Y,
Papenfort K,
Reinhardt R,
Sharma CM,
Vogel J
(2012)
The EMBO Journal, 31, 20, 4005-19, 10.1038/emboj.2012.229, 22922465
The EMBO Journal, 31, 20, 4005-19, 10.1038/emboj.2012.229, 22922465
RelA protein stimulates the activity of RyhB small RNA by acting on RNA-binding protein Hfq
Publication
Argaman L,
Elgrably-Weiss M,
Hershko T,
Vogel J,
Altuvia S
(2012)
PNAS, 109, 12, 4621-6, 10.1073/pnas.1113113109, 22393021
PNAS, 109, 12, 4621-6, 10.1073/pnas.1113113109, 22393021
The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair
Publication
Papenfort K,
Podkaminski D,
Hinton JC,
Vogel J
(2012)
PNAS, 109, 13, E757-64, 10.1073/pnas.1119414109, 22383560
PNAS, 109, 13, E757-64, 10.1073/pnas.1119414109, 22383560
Small RNAs of the Bradyrhizobium/Rhodopseudomonas lineage and their analysis
Publication
Madhugiri R,
Pessi G,
Voss B,
Hahn J,
Sharma CM,
Reinhardt R,
Vogel J,
Hess WR,
Fischer H,
Evguenieva-Hackenberg E
(2012)
RNA Biology, 9, 1, 47-58, 10.4161/rna.9.1.18008, 22258152
RNA Biology, 9, 1, 47-58, 10.4161/rna.9.1.18008, 22258152
Global regulatory functions of the Staphylococcus aureus endoribonuclease III in gene expression
Publication
Lioliou E,
Sharma CM,
Caldelari I,
Helfer A,
Fechter P,
Vandenesch F,
Vogel J,
Romby P
(2012)
PLOS Biology, 8, 6, e1002782, 10.1371/journal.pgen.1002782, 22761586
PLOS Biology, 8, 6, e1002782, 10.1371/journal.pgen.1002782, 22761586
Use of aptamer tagging to identify in vivo protein binding partners of small regulatory RNAs
Publication
Corcoran CP,
Rieder R,
Podkaminski D,
Hofmann B,
Vogel J
(2012)
In: Bacterial Regulatory RNA: Methods and protocols (ed Keiler KC), 905, 177-200, 10.1007/978-1-61779-949-5_11, 22736004
In: Bacterial Regulatory RNA: Methods and protocols (ed Keiler KC), 905, 177-200, 10.1007/978-1-61779-949-5_11, 22736004