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Deep sequencing-based discovery of the Chlamydia trachomatis transcriptome
Publikation
Albrecht M,
Sharma CM,
Reinhardt R,
Vogel J,
Rudel T
(2010)
Nucleic Acids Research, 38, 3, 868-77, 10.1093/nar/gkp1032, 19923228
Nucleic Acids Research, 38, 3, 868-77, 10.1093/nar/gkp1032, 19923228
A simple and rapid method of bacterial transformation
Publikation
Wilharm G,
Lepka D,
Faber F,
Hofmann J,
Kerrinnes T,
Skiebe E
(2010)
Journal of Microbiological Methods, 80, 2, 215-6, 10.1016/j.mimet.2009.12.002, 20004690
Journal of Microbiological Methods, 80, 2, 215-6, 10.1016/j.mimet.2009.12.002, 20004690
Accurately measuring recombination between closely related HIV-1 genomes
Publikation
Schlub TE,
Smyth RP,
Grimm AJ,
Mak J,
Davenport MP
(2010)
PLOS Computational Biology, 6, 4, e1000766, 10.1371/journal.pcbi.1000766, 20442872
PLOS Computational Biology, 6, 4, e1000766, 10.1371/journal.pcbi.1000766, 20442872
Experimental discovery of small RNAs in Staphylococcus aureus reveals a riboregulator of central metabolism
Publikation
Bohn C,
Rigoulay C,
Chabelskaya S,
Sharma CM,
Marchais A,
Skorski P,
Borezée-Durant E,
Barbet R,
Jacquet E,
Jacq A,
Gautheret D,
Felden B,
Vogel J,
Bouloc P
(2010)
Nucleic Acids Research, 38, 19, 6620-36, 10.1093/nar/gkq462, 20511587
Nucleic Acids Research, 38, 19, 6620-36, 10.1093/nar/gkq462, 20511587
The small RNAs of Salmonella
Publikation
Javayel S,
Papenfort K,
Vogel J
(2010)
In: Salmonella: From Genome to Function (ed Prowollik S)
In: Salmonella: From Genome to Function (ed Prowollik S)
PAR-CliP--a method to identify transcriptome-wide the binding sites of RNA binding proteins
Publikation
Hafner M,
Landthaler M,
Burger L,
Khorshid M,
Hausser J,
Berninger P,
Rothballer A,
Ascano M,
Jungkamp A,
Munschauer M,
Ulrich A,
Wardle GS,
Dewell S,
Zavolan M,
Tuschl T
(2010)
Journal of Visualized Experiments, 41, pii: 2034, 10.3791/2034, 20644507
Journal of Visualized Experiments, 41, pii: 2034, 10.3791/2034, 20644507
Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP
Publikation
Hafner M,
Landthaler M,
Burger L,
Khorshid M,
Hausser J,
Berninger P,
Rothballer A,
Ascano M,
Jungkamp A,
Munschauer M,
Ulrich A,
Wardle GS,
Dewell S,
Zavolan M,
Tuschl T
(2010)
Cell, 141, 1, 129-41, 10.1016/j.cell.2010.03.009, 20371350
Cell, 141, 1, 129-41, 10.1016/j.cell.2010.03.009, 20371350
Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation
Publikation
Pfeiffer V,
Papenfort K,
Lucchini S,
Hinton JC,
Vogel J
(2009)
Nature Structural & Molecular Biology, 16, 8, 840-6, 10.1038/nsmb.1631, 19620966
Nature Structural & Molecular Biology, 16, 8, 840-6, 10.1038/nsmb.1631, 19620966
Synthetic control of a fitness tradeoff in yeast nitrogen metabolism
Publikation
Bayer TS,
Hoff KG,
Beisel CL,
Lee JJ,
Smolke CD
(2009)
Journal of Biological Engineering, 3, 1, 10.1186/1754-1611-3-1, 19118500
Journal of Biological Engineering, 3, 1, 10.1186/1754-1611-3-1, 19118500
Fast mapping of short sequences with mismatches, insertions and deletions using index structures
Publikation
Hoffmann S,
Otto C,
Kurtz S,
Sharma CM,
Khaitovich P,
Vogel J,
Stadler PF,
Hackermüller J
(2009)
PLOS Computational Biology, 5, 9, e1000502, 10.1371/journal.pcbi.1000502, 19750212
PLOS Computational Biology, 5, 9, e1000502, 10.1371/journal.pcbi.1000502, 19750212