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Bacterial Adaptation to the Host's Diet Is a Key Evolutionary Force Shaping Drosophila-Lactobacillus Symbiosis
Publikation
Martino ME,
Joncour P,
Leenay R,
Gervais H,
Shah M,
Hughes S,
Gillet B,
Beisel CL,
Leulier F
(2018)
Cell Host & Microbe, 24, 1, 109-119.e6, 10.1016/j.chom.2018.06.001, 30008290
Cell Host & Microbe, 24, 1, 109-119.e6, 10.1016/j.chom.2018.06.001, 30008290
New insights into the cellular temporal response to proteostatic stress
Publikation
Rendleman J,
Cheng Z,
Maity S,
Kastelic N,
Munschauer M,
Allgoewer K,
Teo G,
Zhang YB,
Lei A,
Parker B,
Landthaler M,
Freeberg L,
Kuersten S,
Choi H,
Vogel C
(2018)
eLife, 7, e39054, 10.7554/eLife.39054, 30272558
eLife, 7, e39054, 10.7554/eLife.39054, 30272558
Functional analysis of Salmonella Typhi adaptation to survival in water
Publikation
Kingsley RA,
Langridge G,
Smith SE,
Makendi C,
Fookes M,
Wileman TM,
El Ghany MA,
Keith Turner A,
Dyson ZA,
Sridhar S,
Pickard D,
Kay S,
Feasey N,
Wong VK,
Barquist L,
Dougan G
(2018)
Environmental Microbiology, 20, 11, 4079-4090, 10.1111/1462-2920.14458, 30450829
Environmental Microbiology, 20, 11, 4079-4090, 10.1111/1462-2920.14458, 30450829
Single-Cell RNA-Seq Reveals the Transcriptional Landscape and Heterogeneity of Aortic Macrophages in Murine Atherosclerosis
Publikation
Cochain C,
Vafadarnejad E,
Arampatzi P,
Pelisek J,
Winkels H,
Ley K,
Wolf D,
Saliba AE,
Zernecke A
(2018)
Circulation Research, 122, 12, 1661-1674, 10.1161/CIRCRESAHA.117.312509, 29545365
Circulation Research, 122, 12, 1661-1674, 10.1161/CIRCRESAHA.117.312509, 29545365
Bacterial RNA Biology on a Genome Scale
Publikation
Hör J,
Gorski SA,
Vogel J
(2018)
Molecular Cell, 70, 5, 785-799, 10.1016/j.molcel.2017.12.023, 29358079
Molecular Cell, 70, 5, 785-799, 10.1016/j.molcel.2017.12.023, 29358079
Host-Pathogen Transcriptomics by Dual RNA-Seq
Publikation
Westermann AJ,
Vogel J
(2018)
In: Arluison V., Valverde C. (eds) Bacterial Regulatory RNA, Methods in Molecular Biology, 1737, 59-75, 10.1007/978-1-4939-7634-8_4, 29484587
In: Arluison V., Valverde C. (eds) Bacterial Regulatory RNA, Methods in Molecular Biology, 1737, 59-75, 10.1007/978-1-4939-7634-8_4, 29484587
The Francisella novicida Cas12a is sensitive to the structure downstream of the terminal repeat in CRISPR arrays
Publikation
Liao C,
Slotkowski RA,
Achmedov T,
Beisel CL
(2018)
RNA Biology, 16, 4, 404-412, 10.1080/15476286.2018.1526537
RNA Biology, 16, 4, 404-412, 10.1080/15476286.2018.1526537
A detailed cell-free transcription-translation-based assay to decipher CRISPR protospacer-adjacent motifs
Publikation
Maxwell CS,
Jacobsen T,
Marshall R,
Noireaux V,
Beisel CL
(2018)
Methods, 143, 48-57, 10.1016/j.ymeth.2018.02.016, 29486239
Methods, 143, 48-57, 10.1016/j.ymeth.2018.02.016, 29486239
MetaMap: an atlas of metatranscriptomic reads in human disease-related RNA-seq data
Publikation
Simon LM,
Karg S,
Westermann AJ,
Engel M,
Elbehery AH,
Hense B,
Heinig M,
Deng L,
Theis FJ
(2018)
GigaScience, 7, 6, giy070, 10.1093/gigascience/giy070, 29901703
GigaScience, 7, 6, giy070, 10.1093/gigascience/giy070, 29901703
Machine learning identifies signatures of host adaptation in the bacterial pathogen Salmonella enterica
Publikation
Wheeler NE,
Gardner PP,
Barquist L
(2018)
PLOS Genetics, 14, 5, e1007333, 10.1371/journal.pgen.1007333, 29738521
PLOS Genetics, 14, 5, e1007333, 10.1371/journal.pgen.1007333, 29738521