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HIV-2 evades restriction by ZAP through adaptations in the U3 LTR region despite increased CpG levels
Publikation
Kmiec D,
Nchioua R,
Gabel A,
Vlachou A,
Ganskih S,
Erdemci-Evin S,
A Lapp S,
G Carnathan D,
E Bosinger S,
Berkhout B,
T Das A,
Munschauer M,
Kirchhoff F
(2025)
Nucleic Acids Research, 53, 16, gkaf826, 10.1093/nar/gkaf826, 40884399
Nucleic Acids Research, 53, 16, gkaf826, 10.1093/nar/gkaf826, 40884399
Micromix: web infrastructure for visualizing and remixing microbial 'omics data
Publikation
Hayward RJ,
Ebbecke T,
Fricke H,
Nguyen VQ,
Barquist L
(2025)
GigaScience, 14, giae120, 10.1093/gigascience/giae120, 39898450
GigaScience, 14, giae120, 10.1093/gigascience/giae120, 39898450
Cas9-independent tracrRNA cytotoxicity in Lacticaseibacillus paracasei
Publikation
Arifah AQ,
Vento JM,
Kurrer I,
Achmedov T,
Beisel CL
(2025)
microLife, 6, uqaf013, 10.1093/femsml/uqaf013, 40727907
microLife, 6, uqaf013, 10.1093/femsml/uqaf013, 40727907
Cell type-specific purifying selection of synonymous mitochondrial DNA variation
Publikation
Lareau CA,
Maschmeyer P,
Yin Y,
Gutierrez JC,
Dhindsa RS,
Gribling-Burrer AS,
Zielinski S,
Hsieh YH,
Nitsch L,
Dimitrova V,
Nalbant B,
Buquicchio FA,
Abay T,
Stickels RR,
Ulirsch JC,
Yan P,
Wang F,
Miao Z,
Sandor K,
Daniel B,
Liu V,
Mendez PL,
Knaus P,
Meyer M,
Greenleaf WJ,
Kundaje A,
Smyth RP,
Munschauer M,
Ludwig LS,
Satpathy AT
(2025)
PNAS, 122, 30, e2505704122, 10.1073/pnas.2505704122, 40705423
PNAS, 122, 30, e2505704122, 10.1073/pnas.2505704122, 40705423
Biased sampling driven by bacterial population structure confounds machine learning prediction of antimicrobial resistance
Publikation
Yu Y,
Wheeler NE,
Barquist L
(2025)
PLOS Biology, 23, 12, e3003539, 10.1371/journal.pbio.3003539, 41401143
PLOS Biology, 23, 12, e3003539, 10.1371/journal.pbio.3003539, 41401143
A distinct priming phase regulates CD8 T cell immunity by orchestrating paracrine IL-2 signals
Publikation
Jobin K,
Seetharama D,
Rüttger L,
Fenton C,
Kharybina E,
Wirsching A,
Huang A,
Knöpper K,
Kaisho T,
Busch DH,
Vaeth M,
Saliba AE,
Graw F,
Pulfer A,
González SF,
Zehn D,
Liang Y,
Ugur M,
Gasteiger G,
Kastenmüller W
(2025)
Science, 388, 6743, eadq1405, 10.1126/science.adq1405, 40208984
Science, 388, 6743, eadq1405, 10.1126/science.adq1405, 40208984
Low-input RNA-seq suggests metabolic specialization underlying morphological heterogeneity in a gut commensal bacterium
Publikation
Bornet E,
Prezza G,
Cecchino L,
Jenniches L,
Behrends J,
Tawk C,
Huang KC,
Strowig T,
Vogel J,
Barquist L,
Saliba AE,
Westermann AJ
(2025)
Cell Reports, 44, 6, 115844, 10.1016/j.celrep.2025.115844, 40526469
Cell Reports, 44, 6, 115844, 10.1016/j.celrep.2025.115844, 40526469
Single Cell Analysis Reveals Dynamic Changes of Distinct Cell Populations in Human Nickel Allergy
Publikation
Schmidt M,
Knorz A,
Meder K,
Goller S,
Imdahl F,
Rocca Y,
Goebeler M,
Khoueiry P,
Schmidt M,
Knorz A,
Meder K,
Goller S,
Imdahl F,
Rocca Y,
Goebeler M,
Khoueiry P
(2025)
Allergy, (Online ahead of print), 10.1111/all.70108, 41090989
Allergy, (Online ahead of print), 10.1111/all.70108, 41090989
A Small RNA Derived From the 5' End of the IS200 tnpA Transcript Regulates Multiple Virulence Regulons in Salmonella typhimurium
Publikation
Trussler RS,
Scherba NQ,
Kooshapour H,
Ellis MJ,
Förstner KU,
Albert M,
Westermann AJ,
Haniford DB
(2025)
Molecular Microbiology, 124, 5, 413-432, 10.1111/mmi.70016, 40808239
Molecular Microbiology, 124, 5, 413-432, 10.1111/mmi.70016, 40808239
RNA toehold switch-based reporter assay to assess bacterial uptake of antisense oligomers
Publikation
Sarkar P,
Popella L,
Pérez-Jiménez S,
Vogel J
(2025)
mBio, 16, 4, e0398324, 10.1128/mbio.03983-24, 40035593
mBio, 16, 4, e0398324, 10.1128/mbio.03983-24, 40035593